Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015824127.1_cds_XP_016501752.1_15455
CDS Infomation	[gene=LOC107820058] [db_xref=GeneID:107820058] [protein=E3 ubiquitin-protein ligase PRT6-like isoform X2] [protein_id=XP_016501752.1] [location=join(13562..13627,17686..18795,19609..20786,20939..21079,36196..36439,36512..37219,41860..42060,42185..42849,43161..43212,43288..43915,44005..44213,44325..44863,44956..45060,45149..45215,45327..45404,46595..46663,47327..47401)] [gbkey=CDS]
Sequence	ATGCAGATTGACTCTTCACCGGAGGAGGAGCCGATTATGGCTACTCCTCAGGAGCTTATT CTTCAGAGGCTTGAGAATCTTGGAGTTCCTGCAGCAAATTTGGAGCACCGGCAGCCTGGT TTAATTGTTTATGTGAAGAATAATAAGTCTCAAATTGGAGTGCTTGTCTCTGCTCTTTTG CCAACTAATGAAGAGGAAATGGATGGTATTTTGGATCTGCAGATAGATTCTCCAAAATCC ACAGGCAGCTCAGCCATTAAAGATTTATTCCACGAAAGTATGATCTGGTTACAATGGTTG ATGTTTGAAGGCGAACCAAGAGGAGCACTAGAGCAACTAGCGAGCTCTGGTCAGCATGGT GTTTGTGGGGCTGTTTGGGGGAGTAATGATATCGCGTACCGTTGCCGTACATGTGAGCAT GATCCAACATGTGCAATATGTGTTCCATGTTTCCAGAATGGAAACCACAAGGACCATGAT TACTCAATCATATATACGGGTGGTGGCTGCTGTGATTGTGGAGATGTATCTGCTTGGAAA CGTTCGGGATTCTGTTCCAAGCATAAAGGTGTGGAGCAGATACAACCTCTTCCGGAAGAG TTTGCTAATTCTTTGGGCCCCGTTCTTGATTCCTTGCTGTCTTGTTGGAGAAAAGGGCTC CTATTTGCAGAAAGCATCTCTGAGCAAAGTCCAAGACTAAATAGTCATGCAACTGAATAT AAAAGTATCACAGATGAGTTGACGTCAGCAGTGGTTGAGATGCTTTTGGATTTCTGCAAG AATAGTGAAAGTTTGCTTAGTTTTATCTCTAGAAGGGTATTCTCTTCAGAAGGTTTATTA TATGTTCTGGTGAGGGCAGAGAGGTTCATGATCAGTGGTAATATTGTGAGGAAGCTCCAT GAATTGCTCTTGAAATTGTTGGGTGAACCTCAATTTAAGTATGAGTTCGCTAAAGTATTT CTTAGCTATTACCCAACTGTTGTGAATGAAGCAATAAAGGACAGTAATGACAGAGTTTTC AAAAAATATCCACTTCTCTCAACATTCTCTGTGCAGATATTTACGGTGCCTACTTTGACC CCACGTCTTGTAAAGGAGATGAATCTTTTGGCCATGTTGCTGGACTGTTTAGGGGACATA CTTATGTCTTGTGCAGGAGAAAATGGTAGATTGAAGGTCATTAAATGGGGAAATTTGTAT GAAACTACTCTTCGTGTAGTTGAAGACATTCGATTTGTCATGAGTCATTCTGCTGTACCT AGATACATGACTCGTGATCGACGGGATATACTCAGGACGTGGATGAAGCTATTGACCTTT GTGCAAGGAATGAACCCTCAAAAGAGAGACATCGGCATCCATGTAGAAGAGGAGAATGAA AATATGAATTTGCCTTTTGTTTTGGGTCATACAATTGCAAATATTCACTCTCTATTGGTG GGTGGTGCATTCTCTATTAGTAGCACTGAAGATGCTGATGATGCTCTATTCACGCATATA CAAGATTTTGAAGACCAAGATAGTCAAAGACATGCAAAAGTTGGAAAGCTATCACCGGAA AGTTCTGTTAGTAGTGTGACTGGAAGGAGTCCATTGGAACATGCATCCGTGACTCCTGAA TCAAAATCTGATAGTTTTCCGGTACCGTCATCTGTTCTATGGTTGACATTTGAGTGCCTG AGGGCCATCGAGAATTGGTTAGGGGTGGATAACACATCAGGACCTTTCCTTCACGTCTTA TCTCCGAAAACAAACTCCAGTTCTGGAAATAATTTCTTTGCCCCGAAAAGAACACTTTCG AAGTTTAGAAGGGGGAGGCAAATTATTAGATCTCATAGTCCTTCAAATGGCATTAGAATC TCAAGTTCAACTGAAGATTCCAATAAGCAATATTCTTATCTGTCACCGAATGGTGGTATT GCCTTTGATTCTGGACAGAATTTGGCCCAAGAAACAACTGGCTTTGGTGGTGTTGATGAC AGTATACTTGAAGGAGATTATGACGTTGAGTTGGAAGCTCTCCGGGTGCTGAGTTTGTCT GATTGGCCTAATATAGCATATAAAGTCAGTTTGCAGGATATATCAGTTCATATTCCACTG CATCGATTACTTTCAATGGTTTTACAGAGGGCACTCAGACAATGTTATGGTGAAACTGCC CTTGGTGGTAGTGGTACCAATTCGTCATCTGCTAACTATCATGACTTTTTTGGCAAAATA TTGGGAGGCTGCCACCCACTTGGCTTTTCTGCCTTCATTATGGAACATGCTCTCCAAATT AAGGTGTTTTGTGCCCAGGTGCACGCTGGAATGTGGCGTAGGAATAGTGATGCTGCCATA TTATTCTGTGAGTGGTCTGAGCAGGGTCTAGATCTTGATCTCTTTCTGCTCCAGTGTTGT GCTGCACTAGGCCCATCCGATCAATATGTTACTAGGATTTTAGAACGTTTTGAGCTCTCA GATTACTTATCCTTGAATCTTGAACGCTCTAATGTGTATGAGCCGACTATAGTTCAAGAG ATGCTTACTCTTATCATACAAATAGTGAAAGAAAGACGGTTTTCTGGGCTATCCCCTAGT GAGTGTTTGCAAAGGGAATTGGTATATAAACTATCAACTGGTGATGCCACTCGTAGCCAG TTGGTGAAATCTTTGCCCCGTGACTTGTCCAAGATCGATAAACTTCAAGAGGTTTTGGAT AGGATAGCAGTGTACTCCAATCCCTCTGGCATGAATCAGGGTATGTATAAACTCCGGGCG TCCTATTGGACGGAGCTAGATTTATACCATCCTCGTTGGAACTCAAAGGAGTTGCAAGTT GCTGAAGAGAGATACATGCGGTTCTGTAATGTATCAGCATGGACCAATCAACTTCCAAAA TGGACCAAGATTTATCCACCTCTTGGTGGAATAGCTCAAATAGCTACTTGCAGGACAACA CTCCAAATAGTTCGGGCTGTTGTATTCTATGCTATTTTCTCTGATAAATCAAACGCTTCA CGTGCTCCAGATGGTGTAGTGTTAACAGCATTGCATTTGTTGTCTCTTGCATTAGATATT TGTTTTATGCATGGGGGATCTGGTGATCATAGTTGCTATGAGGATGGTGTCATTCCGATT GTAGCACTAGCTAGTGAAGAATTGTCATTGGGTAAATATGGTGATCAGAGCTTGTTGTCT CTTTTGGTTTTGTTGATGAGGAAATTTAGGAAAGAAAACGACTTTGTGGAAGCTGGAATA TTCAACCTCTCTTCTTTTGTTGGAAGTGTATTGAAAAAATTTGCTGAACTTCAATCTGGA TGCAAGATAAAACTTCAAGACCTTGCACCTGAGGTGGTCGATCAACTATCGCAATCTATA TTGACCGGTGATACTAACAACTTGGGATCAGTTTCAGACAGTGATAAGCGCAAAGCTAAA GCTCGAGAGAGACAAGCTGCTATAATGGAAAAGATGAGGGTGCAACAATCTAAGTTTTTA AAGAGCATAGATTCCTCTGCAGAAGCTGGTTCAGATGATTCTAAACTTGGTAAGGAAAGA AGTGAATCAGATGTTAGACGTAATTCTGAAGAGGCTACTCCATTCATTTGCTCTCTCTGT CATGATCCAAATTCTAAAAGTCCTCTATCATACCTGATTCTTCTTCAGAAATCCAGGCAA CTGACTTTCACCAATAGAGGACCTCCTTCGTGGGAACAAACCCCCAATTCCAGGAAAGAA CCAGCATCTTGTGCCAAAAGAATGACAAATATCGCATCTCAAAGGAGCATTTTATCAAGC AGCCGAGAAGTGATTTCATCTTTTCGGTTGACGCAATTGATTCAACATGCAATAAATGAG TTTGCTCTGGAAGGGAAACCTAAGGAAGTAGGAGCATTTTTTGAATATGTTAGGGCGAAG TTCCCAGCATTTAAGATTCAACTGCCTTGCACATCAAGCAATGCCGACGAAGACGCAGAT TTTTCTCTTGAGATGCTTGAAGAACAATTATACTCGTTCACTCGCGAAAAAGTGGACGTC AATTCGTGGTCCTGGGATTTTTTAAGAAATGATAAGAAAATTTCTGCAGGAGGAGGTGGT GGGAGTGCTGAGTCACTTTTGCTTGGGAAGTACATTTCTGCTCTTGCAGGAGAAAATCTT AATAGTCCTTCTGCATCTGAAAGTGCGTACAAGGTTCAACTAGAGTCAAGTATGCCGCTT TCAGCATATCACGGATTTGGTCTCTCAGATTGTGATGGAATTTATCTTTCATCGTGTGGA CATGCTGTGCATCAGGGATGTCTTGACTGCTATTTATCGTCACTAAAGGAAAGATATAAC AGAAGACTTGTTTTCGAAGGAGGTCATATTGTAGATCCAGATCAGGGTGAGTTTCTTTGT CCTGTATGCCGTGGACTTGCCAACTCGGTCCTGCCAGCATTACCTGCAGATTCCGGGAGG TTCGCATCCATTTGCTCAACTTCCGGTCCATCCGATGCTGTTGGCCCTTCACCGTTGTCA AGTGGAGCGGTTGATGCACTTCACTTTCAAGAAGCTTTATTTCTCCTACAAAATGCAGCT GCTGTTGTTAGAAGTAGAGAGATTCTCCAAAGACTTCCACTTTGGCAGTTTGGGCGGATG AAAGTAAACATTGAACCTGTGTATCGTATGTTGTGTGGAATGTACTTTCCAGACAAGGAG AAGATTTCAGAATCTGGTAGACTTAGTCACTCTTTGATTCTGTATGACACTCTTAGGTAC TCACTTGTAGCCACTGAAATTGCTGCTCGAGCGGGAAAGACATCATTAGCTCCAAACTAC AGTCTTGGTGCCTTGTACAAAGAACTCCAATCTTCAAATGGTTTTATATTGTCTTTGTTA CTAAGTATTGTACAAAGCACACAAACAAAGAACTCACTTACTGTCCTCTTGAGATTGAGA GGCATTCAGCTGTTTGCAGAGTCTATATGCTCTGGCACTTCTGCAGATAAAATTCCAGAT CCATCTTTTGGAGCTAATATGCGAGACATCTTAGAATGCGCTGAAACAGAAGATCAGTAT CCTGATATTCAGTTTTGGAGATGGTCCTCTGATCCAGTTCTTGCGCATGATGCTTTTTCT TCATTAATGTGGACAATATATTGCCTTCCATGTCCATTGTTGTCATGCGAAGATGCCTTC TTGTCCCTTGTTCATCTTTTCTATGTTGTTGCTGTCACTCAGGCTGTAATAACCTATTGC AGAGAGCATCAATGCAATTTGCCTGAGTTAGGATGCAGTGATTCTCTACTTACTGACATC TATAAAGTAACTGGAGAACATGGAGTTGCTCAGGAATATTTTAATTCTAATTTTATAGAA ACTTCTTATGATATCAAAGATGCAATTCGCAGTTTGACTTTTCCTTACTTAAGAAGATGT ATATTGTTGTGGAAATTGATTCATTCTTCTAGAGTGGTGCCATTTAGCGGTGGGATTAAC AAGTTAGATGAATCCGCATATTCAACTAATGAACTTATGTACTGTGGTGATAACATTGCT ACAGAGCTCGTCCAGATCGAAAAGTTGGAAAAGATATTAAAGATTCCCACACTTGATAAT GTTCTCAATGATATCTCAATTCGTCCAATGGTTCAAAAATGGCTGAATCATTTCTACAAG GAGTTTGAAACTTGTAGTCTAAAGGATGTTTTATATTCCACTCCTGCAACCCCATTCAGA ATGATGCTTCTGCCTCATCTTTATCAGGACCTCTTGCAGAGGTATATTAAACAGAATTGC CCAGATTGCGGAGCTGTTCTGAAGGATCCTGCATTGTGTTTGTTATGTGGTAAATTGTGC TCCGCAAGTTGGAAGACATGTTGCAGGGAAATTGGGTGCCAAACTCATGCAATGGCCTGT GGTGCTGGTACTGGGGTGTTCTTGTTGATCAGAAAAACAACAATATTGCTTCAAAGATCT GCTCGTCAGGCGCCATGGCCATCACCATATTTGGATGCATTTGGAGAAGAGGATATTGAA ATGCATAGGGGAAAGCCATTATATCTAAATGAGGAACGTTATGCTGCCTTAACTCATATG GTGGCTTCTCATGGATTAGATCGAAGTTCAAAGGTGCTTCGTCAGACAACTATTGGCGCG TTTTTCATGCTTTAG

Peptide Sequence

PEP ID	XP_016501752.1
PEP Infomation	PREDICTED: E3 ubiquitin-protein ligase PRT6-like isoform X2 [Nicotiana tabacum]
Sequence	MQIDSSPEEEPIMATPQELILQRLENLGVPAANLEHRQPGLIVYVKNNKSQIGVLVSALL PTNEEEMDGILDLQIDSPKSTGSSAIKDLFHESMIWLQWLMFEGEPRGALEQLASSGQHG VCGAVWGSNDIAYRCRTCEHDPTCAICVPCFQNGNHKDHDYSIIYTGGGCCDCGDVSAWK RSGFCSKHKGVEQIQPLPEEFANSLGPVLDSLLSCWRKGLLFAESISEQSPRLNSHATEY KSITDELTSAVVEMLLDFCKNSESLLSFISRRVFSSEGLLYVLVRAERFMISGNIVRKLH ELLLKLLGEPQFKYEFAKVFLSYYPTVVNEAIKDSNDRVFKKYPLLSTFSVQIFTVPTLT PRLVKEMNLLAMLLDCLGDILMSCAGENGRLKVIKWGNLYETTLRVVEDIRFVMSHSAVP RYMTRDRRDILRTWMKLLTFVQGMNPQKRDIGIHVEEENENMNLPFVLGHTIANIHSLLV GGAFSISSTEDADDALFTHIQDFEDQDSQRHAKVGKLSPESSVSSVTGRSPLEHASVTPE SKSDSFPVPSSVLWLTFECLRAIENWLGVDNTSGPFLHVLSPKTNSSSGNNFFAPKRTLS KFRRGRQIIRSHSPSNGIRISSSTEDSNKQYSYLSPNGGIAFDSGQNLAQETTGFGGVDD SILEGDYDVELEALRVLSLSDWPNIAYKVSLQDISVHIPLHRLLSMVLQRALRQCYGETA LGGSGTNSSSANYHDFFGKILGGCHPLGFSAFIMEHALQIKVFCAQVHAGMWRRNSDAAI LFCEWSEQGLDLDLFLLQCCAALGPSDQYVTRILERFELSDYLSLNLERSNVYEPTIVQE MLTLIIQIVKERRFSGLSPSECLQRELVYKLSTGDATRSQLVKSLPRDLSKIDKLQEVLD RIAVYSNPSGMNQGMYKLRASYWTELDLYHPRWNSKELQVAEERYMRFCNVSAWTNQLPK WTKIYPPLGGIAQIATCRTTLQIVRAVVFYAIFSDKSNASRAPDGVVLTALHLLSLALDI CFMHGGSGDHSCYEDGVIPIVALASEELSLGKYGDQSLLSLLVLLMRKFRKENDFVEAGI FNLSSFVGSVLKKFAELQSGCKIKLQDLAPEVVDQLSQSILTGDTNNLGSVSDSDKRKAK ARERQAAIMEKMRVQQSKFLKSIDSSAEAGSDDSKLGKERSESDVRRNSEEATPFICSLC HDPNSKSPLSYLILLQKSRQLTFTNRGPPSWEQTPNSRKEPASCAKRMTNIASQRSILSS SREVISSFRLTQLIQHAINEFALEGKPKEVGAFFEYVRAKFPAFKIQLPCTSSNADEDAD FSLEMLEEQLYSFTREKVDVNSWSWDFLRNDKKISAGGGGGSAESLLLGKYISALAGENL NSPSASESAYKVQLESSMPLSAYHGFGLSDCDGIYLSSCGHAVHQGCLDCYLSSLKERYN RRLVFEGGHIVDPDQGEFLCPVCRGLANSVLPALPADSGRFASICSTSGPSDAVGPSPLS SGAVDALHFQEALFLLQNAAAVVRSREILQRLPLWQFGRMKVNIEPVYRMLCGMYFPDKE KISESGRLSHSLILYDTLRYSLVATEIAARAGKTSLAPNYSLGALYKELQSSNGFILSLL LSIVQSTQTKNSLTVLLRLRGIQLFAESICSGTSADKIPDPSFGANMRDILECAETEDQY PDIQFWRWSSDPVLAHDAFSSLMWTIYCLPCPLLSCEDAFLSLVHLFYVVAVTQAVITYC REHQCNLPELGCSDSLLTDIYKVTGEHGVAQEYFNSNFIETSYDIKDAIRSLTFPYLRRC ILLWKLIHSSRVVPFSGGINKLDESAYSTNELMYCGDNIATELVQIEKLEKILKIPTLDN VLNDISIRPMVQKWLNHFYKEFETCSLKDVLYSTPATPFRMMLLPHLYQDLLQRYIKQNC PDCGAVLKDPALCLLCGKLCSASWKTCCREIGCQTHAMACGAGTGVFLLIRKTTILLQRS ARQAPWPSPYLDAFGEEDIEMHRGKPLYLNEERYAALTHMVASHGLDRSSKVLRQTTIGA FFML

Transcript Sequence

Gene sequence data has not been registered.